PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast04G151000.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family NAC
Protein Properties Length: 385aa    MW: 42740.6 Da    PI: 4.9361
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast04G151000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM99.26e-31561991128
                 NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.... 77 
                         lp+G++F+P+d el+ e+L++kv + +      +  +e+i++++    i++++P++Lp  +k++ ++ +fF++ +++y  gkrk+r     
  Brast04G151000.1.p  56 LPAGVKFDPSDLELL-EHLEQKVGQGDskphmfI--DEFIPTLEndegICYSHPENLP-GTKKDGSSAHFFHRVSNAYGCGKRKRRRisns 142
                         799************.99*****99986766432..333433322234**********.556778899******************75777 PP

                 NAM  78 .....tksgyWkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128
                               ++ +W++tgk+k++++ +g  +g kk+Lv+yk   + +k+ ktdWvmh+y+l
  Brast04G151000.1.p 143 vhttsYDHVRWHKTGKSKPIYD-NGVMKGWKKILVLYKSsqTGSKPDKTDWVMHQYHL 199
                         7765444888************.999***********6422556777*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.31E-3541218IPR003441NAC domain
PROSITE profilePS5100529.89556218IPR003441NAC domain
PfamPF023655.4E-1457199IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    Send to blast
MARSWLITCR GVAKKIRNVN CSSSQISEAG AEACRECPNC KHLIDNSDVA IQWPGLPAGV  60
KFDPSDLELL EHLEQKVGQG DSKPHMFIDE FIPTLENDEG ICYSHPENLP GTKKDGSSAH  120
FFHRVSNAYG CGKRKRRRIS NSVHTTSYDH VRWHKTGKSK PIYDNGVMKG WKKILVLYKS  180
SQTGSKPDKT DWVMHQYHLG VEENETVGEY VISKILYQLK AKYMEKSETE IANEESDAFT  240
ARNGPKTPKA NTPKPCRTNN SPGETEQNDL ILPDEDGEAE IPDVRLFDGA ENPAWCDIGS  300
LGVEVASQAQ PTLEESLHCH EVFDSILSQD RNETLGNNLS AFDGLPDNFD LGTLPDFLIS  360
GQDVQFCSFG SFGSWLDSTD PLET*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1132137KRKRRR
2133137RKRRR
3134138KRRRI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003572678.20.0PREDICTED: NAC domain-containing protein 8-like
SwissprotQ6NQK23e-82NAC8_ARATH; NAC domain-containing protein 8
TrEMBLI1IB620.0I1IB62_BRADI; Uncharacterized protein
STRINGBRADI3G47627.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21103799
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14490.11e-84NAC domain containing protein 85